RareResearch.AI
← Back to atlas

I319F

AlphaMissense: likely benign (0.25)Uncertain significanceTransmembrane · predicted
IsoleucinePhenylalanine at position 319 · Transmembrane helix 1 · WFS1 (Wolframin)

Interactive 3D Structure

Interactive structure
rotate · zoom · variant + 5 Å neighbors
Fullscreen ↗

Computational Predictions

AlphaMissense
0.252
likely benign
AlphaFold pLDDT
61
model confidence
DynaMut2 ΔΔG
pending
not yet computed
ClinVar
Uncertain significance
Uncertain significance/Uncertain risk allele

AlphaMissense + AlphaFold card. This variant is mapped from AlphaMissense pathogenicity and AlphaFold confidence. The DynaMut2 ΔΔG stability prediction and the wild-type/mutant structural comparison (dual-pane + bond network) are computed per-variant and backfill here — they require a DynaMut2 submission, unlike the precomputed AlphaMissense score.

Clinical Evidence

ClinVar classificationUncertain significance/Uncertain risk allele
Review statuscriteria provided, multiple submitters, no conflicts
Associated conditionsWolfram syndrome 1; Cataract 41; Wolfram-like syndrome; Autosomal dominant nonsyndromic hearing loss 6; Type 2 diabetes mellitus; Inborn genetic diseases
Population frequency (gnomAD v4)Absent from gnomAD v4
cDNA changec.955A>T
ClinVar accessionVCV000872209
Last evaluated2025/05/25 00:00

Not observed in ~730k individuals — consistent with a rare allele (ACMG PM2_supporting).

Full Variant Card

I319F — WFS1 Molecular Atlas Card

Variant type: Missense Substitution: Isoleucine (I) → Phenylalanine (F) at position 319 Domain context: Transmembrane helix 1


AlphaMissense

  • Pathogenicity score: 0.2518
  • Class: likely benign

AlphaFold confidence

  • pLDDT at residue 319: 60.62

DynaMut2 ΔΔG: not yet computed for this variant — AlphaMissense + AlphaFold confidence shown above. Stability ΔΔG and the wild-type/mutant structural comparison backfill behind this note.


Clinical evidence

  • Classification: Uncertain significance/Uncertain risk allele
  • Review status: criteria provided, multiple submitters, no conflicts
  • Associated conditions: Wolfram syndrome 1; Cataract 41; Wolfram-like syndrome; Autosomal dominant nonsyndromic hearing loss 6; Type 2 diabetes mellitus; Inborn genetic diseases
  • cDNA change: c.955A>T
  • ClinVar accession: VCV000872209
  • Last evaluated: 2025/05/25 00:00
  • Submissions: 1

Card generated by wolfram-atlas-batch (missense AlphaMissense mint) on 2026-06-08T02:27:33.454366Z. AlphaMissense (Cheng et al. 2023) · AlphaFold model v6 · UniProt O76024.

Therapeutic Strategy Handoff · prediction

Feed this card to Wolfram Intelligence

Download the I319F PDF below and upload it to Wolfram Intelligence to generate therapeutic-strategy proposals — guanidinium mimetics, sigma-1 agonist docking, NAC thiol-capping. NAC is already on the bench-testing list.

Download I319F PDF card ↓Strategies are AI-generated predictions, not validated therapeutics.