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S544T

AlphaMissense: likely benign (0.09)Uncertain significanceTransmembrane · predicted
SerineThreonine at position 544 · Transmembrane helix 8 · WFS1 (Wolframin)

Interactive 3D Structure

Interactive structure
rotate · zoom · variant + 5 Å neighbors
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Computational Predictions

AlphaMissense
0.092
likely benign
AlphaFold pLDDT
90
model confidence
DynaMut2 ΔΔG
pending
not yet computed
ClinVar
Uncertain significance
Uncertain significance

AlphaMissense + AlphaFold card. This variant is mapped from AlphaMissense pathogenicity and AlphaFold confidence. The DynaMut2 ΔΔG stability prediction and the wild-type/mutant structural comparison (dual-pane + bond network) are computed per-variant and backfill here — they require a DynaMut2 submission, unlike the precomputed AlphaMissense score.

Clinical Evidence

ClinVar classificationUncertain significance
Review statuscriteria provided, multiple submitters, no conflicts
Associated conditions
Population frequency (gnomAD v4)Absent from gnomAD v4
cDNA changec.1630T>A
ClinVar accessionVCV002637822
Last evaluated2023/10/19 00:00

Not observed in ~730k individuals — consistent with a rare allele (ACMG PM2_supporting).

Full Variant Card

S544T — WFS1 Molecular Atlas Card

Variant type: Missense Substitution: Serine (S) → Threonine (T) at position 544 Domain context: Transmembrane helix 8


AlphaMissense

  • Pathogenicity score: 0.0921
  • Class: likely benign

AlphaFold confidence

  • pLDDT at residue 544: 89.69

DynaMut2 ΔΔG: not yet computed for this variant — AlphaMissense + AlphaFold confidence shown above. Stability ΔΔG and the wild-type/mutant structural comparison backfill behind this note.


Clinical evidence

  • Classification: Uncertain significance
  • Review status: criteria provided, multiple submitters, no conflicts
  • cDNA change: c.1630T>A
  • ClinVar accession: VCV002637822
  • Last evaluated: 2023/10/19 00:00
  • Submissions: 1

Card generated by wolfram-atlas-batch (missense AlphaMissense mint) on 2026-06-08T02:27:33.609196Z. AlphaMissense (Cheng et al. 2023) · AlphaFold model v6 · UniProt O76024.

Therapeutic Strategy Handoff · prediction

Feed this card to Wolfram Intelligence

Download the S544T PDF below and upload it to Wolfram Intelligence to generate therapeutic-strategy proposals — guanidinium mimetics, sigma-1 agonist docking, NAC thiol-capping. NAC is already on the bench-testing list.

Download S544T PDF card ↓Strategies are AI-generated predictions, not validated therapeutics.